July 2011 - openSUSE Medical - openSUSE Mailing Lists

FreeMedForms package
by Eric MAEKER 30 Jul '11

30 Jul '11

Hi all, Thanks for your work on FreeMedForms (http://www.freemedforms.com). There are two problems with the package: 1) a user reported a rpath issue After installation of FreeMedForms via opensuse 11.4 rpm, I am unable to start it getting the following error: FreeMedForms: error while loading shared libraries: libExtensionSystem.so.1: cannot open shared object file: No such file or directory jo@linux-1cwt:/usr/lib/FreeMedForms> ldd /usr/bin/FreeMedForms [...] libExtensionSystem.so.1 => not found libUtils.so.1 => not found [...] That I've proposed to solve (in a non-recommanded way) by setting the LD_LIBRARY_PATH with: export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib/FreeMedForms 2) I need some help for the upstream update (new version is 0.5.9~alpha2). I don't really know how to proceed. Do I have to feel a bug in Bugzilla and if yes what tags to be used ? By advance, thanks for your work and time. ----- Eric Maeker, MD (Fr) http://www.freemedforms.com http://www.ericmaeker.fr -- To unsubscribe, e-mail: opensuse-medical+unsubscribe(a)opensuse.org For additional commands, e-mail: opensuse-medical+help(a)opensuse.org

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[reminder] Today's openSUSE Medical IRC Meeting (July 26th)
by Athanasios-Ilias Rousinopoulos 26 Jul '11

26 Jul '11

Hello Mates, We are pleased to remind you the first openSUSE Medical Meeting. Time and meeting place 2011-07-26 21:00 UTC/GMT +3 hours (Just in 2 hours from now!) #opensuse-medical at freenode Topics Welcome News and Announcements New Leadership , Plans and Thoughts Report From openSUSE Collaboration Camp (15-17 of July 2011 , Greece) openSUSE Conference Participation ( 11-14 of September 2011, Nürnberg) openSUSE Medical 11.4 Feedback openSUSE Medical Mailing list Brainstorms and Ideas (Andre Massing) Milestones Milestone 1 : Add new software in the distro (aka packaging new software) Milestone 2 : New applications development (Qt/KDE ones) Milestone 3 : Translation of included applications (openEMR,GnuMed, FreemedForms) Milestone 3 : Translation of the non-imported software (openmolar,sheltler Manager) Milestone 3 : Build the new release of the Distro with KIWI toolset Milestone 4 : openSUSE Medical Artwork Milestone 5 : Setting the release dates for the new release of the distro (openSUSE Medical Beta 1,Beta 2,RC,Final Release) Open Floor – General Discuss More informations at: http://en.opensuse.org/openSUSE:Medical_meetings/ openSUSE Medical Project Leader -- Rousinopoulos Athanasios-Ilias -- About Me-- http://zoumpis.wordpress.com http://www.zoumpis.eu http://en.opensuse.org/User:Zoumpis http://en.opensuse.org/openSUSE:Medical_team -- To unsubscribe, e-mail: opensuse-medical+unsubscribe(a)opensuse.org For additional commands, e-mail: opensuse-medical+help(a)opensuse.org

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openSUSE Medical IRC Meeting Etherpad (July)
by Athanasios-Ilias Rousinopoulos 19 Jul '11

19 Jul '11

Hello Mates, I would like to inform you that the Etherpad for the openSUSE Medical IRC Meeting (July) is now available at : http://ietherpad.com/Mo5jljnvcd Feel free to express your opinion , or add your topic. Recommendation : PLEASE ADD YOUR TOPICS UNTIL FRIDAY 22/07/2011 17:00 UTC/GMT + 3 hours , SO AS THE MEETING TOPICS BE PUBLISHED IN THE NEXT WEEKLY NEWS ISSUE (185) !!!! Regards , Rousinopoulos Athanasios-Ilias openSUSE Medical Project Leader -- About Me-- http://zoumpis.wordpress.com http://www.zoumpis.eu http://en.opensuse.org/User:Zoumpis http://en.opensuse.org/openSUSE:Medical_team -- To unsubscribe, e-mail: opensuse-medical+unsubscribe(a)opensuse.org For additional commands, e-mail: opensuse-medical+help(a)opensuse.org

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Re: [opensuse] interest for scientific computing BoF for oSC?
by Andre Massing 19 Jul '11

19 Jul '11

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 On 07/18/2011 06:02 PM, Vojtěch Zeisek wrote: > Hi > > Dne 18.7.2011 17:34, Andre Massing napsal(a): >> Hi there! > >> I just want to quickly check whether there is a general interest for a >> get together at the oSC of people working with scientific computing (SC) >> software and openSUSE. >> A motivation behind this is to discuss how to improve opensuse as >> platform for scientific computing. I am in general very satisfied with >> my shortterm experience of openSUSE, including tumbleweed, but I after >> my recent switch to this distribution I discovered that quite some >> packages which are interested in my SC corner are either outdated or >> not available in the *official* repos. >> Some of these are: > >> openmpi outdated (1.2.8) >> libatlas (none) >> mayavi and enthought related packages (none) >> python-scipy (none) >> paraview >> petsc,trilinos, armadillo (none) >> netgen, tetgen, triangle (none) >> bullet (none) >> cgal, gts (none) >> scientific python (none) >> suitesparse? > >> Some of these are spread over different projects like Science and >> Education, which results in a significant overlap of packages with >> different version numbers, possible incompatibilities etc. > >> So an idea might be to talk about how to improve the situation, software >> which might be interesting to package (maybe even trying to start a >> unifying SC project) or about what else comes into your mind! > >> As I said that are some first thoughts and I am looking forward to >> hearing any comment, suggestion etc. > >> Cheers, >> Andre > > I'm biologist, so I'm also highly interested in this question, although > I'm not developer (I help with translations and bug reporting). Just to > remind, there are two important mailing lists for those topics: > http://lists.opensuse.org/opensuse-medical/ and > http://lists.opensuse.org/opensuse-edu/ Thanks for the pointers. I subscribed to them as well and will forward the message to those. I recognized a very low traffic on the Education ml, is that project still active? And what about the science project? > There also has been some > extensive discussion on openFATE, see for example > https://features.opensuse.org/query/tag?tag=scientific Oh, great, I was thinking about opening such a feature request, thanks for pointing that out, I will add a list of missing interesting software there. > I personally use R (incl. Rkward and so on), a lot of software written > in Java (hehe, is there real need to package it?;-) > and easy C binaries. > Also software like KBibTeX and so on. Some software is in repos like > Science, Education, devel:/languages:/R:/ (not so much there at all), ... > So I'm interested in such activity, but I'm not sure how much I can > help. :-) Well, that it would be one purpose of a BoF :) Are you planning to attend the conference? Cheers, Andre > Best regards! > Vojtch > -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.17 (GNU/Linux) Comment: Using GnuPG with SUSE - http://enigmail.mozdev.org/ iQEcBAEBAgAGBQJOJGwAAAoJEA79ggnbq9dmAmoH+wXcwD886ZVwcsw/S5ki17IN VyTyU6q1X48OdKT4IC3ANOrilDoRGVdhkg947N1pYncn+mWThgU9ft5M1VfFfBSw oRGE9mPMdPYhHUUH+mW24B0OFO2DHYwb4Eqd2RObAnRdEWwPSZUwWSnypBXtKkqC qJiAxwYkPnCg7exJt28BnCjpuq1HzFAor+j1yjj/WjyRKmJ804eH3pUN2ay56YU0 LxrIXsAPrRFq/C5qY+0xlyKRi3Ta+DWmGjwCrQl8bx0YIk8dn+Nfyi8F6GYjiEpy VVEJsoD5bHMFhOtxmyQQSbfsVbZZZo6N5Bj3RWF8E1m8Zww2S7pzXu+RLb8xeW8= =chuN -----END PGP SIGNATURE----- -- To unsubscribe, e-mail: opensuse-medical+unsubscribe(a)opensuse.org For additional commands, e-mail: opensuse-medical+help(a)opensuse.org

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Re: [opensuse] interest for scientific computing BoF for oSC?
by Andre Massing 18 Jul '11

18 Jul '11

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi! [snip] >>> There also has been some >>> extensive discussion on openFATE, see for example >>> https://features.opensuse.org/query/tag?tag=scientific >> [snip] >> >>> Best regards! >>> Vojtch > > Hi > > I am doing research in digital communications and embedded systems. I have the > same feeling that some packages need to be added to openSUSE (e.g. aigaion > (bibliography management) or IT++ (signal processing)). Maybe a wiki page > would be a start in order to list and vote software that could be added to > openSUSE. This could be a good way of advertising less known software useful > for scientists. Yes, that sounds like a good idea, and I guess the openfate page Vojtěch pointed is a good starting point, especially https://features.opensuse.org/309007 where some people have already listed a bunch of desired packages. The page already contains a growing list for popular scientific software. I just added there packages I would like to see in openSUSE. Maybe you would like to add your wishes there as well? The question is how to proceed with the voting for packages question, since it is probably unreasonable to vote for "Yes, I want to have the 150 packages in opensuse" since some people has to do some work then, concerning especially those package which have not been packaged yet at all in OBS. Lots of things to discuss :) Kind regards Andre -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.17 (GNU/Linux) Comment: Using GnuPG with SUSE - http://enigmail.mozdev.org/ iQEcBAEBAgAGBQJOJIctAAoJEA79ggnbq9dmUTMH/34GFN+BDtqtTbqzTzYHynrZ CavEs0033/NHkqO23JqXPWZ0ks2x8O0cn5gWsQdkK+Nouomg/agvHtQU0rXt5tcr 1s/Jc/4JH4QJbGBh/YZu/I6S+NP4zL9BFGdkIrbhEYABZyEJ7nNxUsG5xcEuZRNo nBMcF8iB1AULH3cl7uWqcuxaCdPqxlTYVfxUfxvPM6cPxQFAfrnf61Hvs56XErBi +6nj1fx9PGxPqwOFcquhsQNLthtWpGceoIbTXGn5wTapxAv3M9stJrrC4ewAca/S Xo5K9cR4jZOxmoYotT7hKpqfnbpBwSTYTBMb3DDtXNvwBfDXmA7LVaMsKCUik64= =RzqY -----END PGP SIGNATURE----- -- To unsubscribe, e-mail: opensuse-medical+unsubscribe(a)opensuse.org For additional commands, e-mail: opensuse-medical+help(a)opensuse.org

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