On Sun, Sep 14, 2003 at 04:11:35PM -0400, Stephen P. Molnar, Ph.D. wrote:
So when I attempt to run the java application I get:
abnormal:/usr/local/lib/CompChem/tinker # csh CompChem/tinker# source tinker.csh CompChem/tinker# ffe Exception in thread "main" java.util.zip.ZipException: No such file or directory at java.util.zip.ZipFile.open(Native Method) at java.util.zip.ZipFile.<init>(ZipFile.java:112) at java.util.jar.JarFile.<init>(JarFile.java:127) at java.util.jar.JarFile.<init>(JarFile.java:65) CompChem/tinker#
Which means that java isn't executing.
What is your JAVA_HOME environment variable set to? It looks like environment initialization problem in your script.
At this point, I said to myself 'Ah Ha! I go back to the old protocol' and compile the software in /usr/scr and then move it to the working directory. Same result. However, if I run the gui in /usr/src it works flawlessly (same compiled software that doesn't work in the working directory.)
Check if environment variables use relative path (starting from current directory, i.e. ../) If so, change them to be absolute, starting with / Regards, -Kastus