[Bug 1021246] New: Postgresql94 POSTGIS 2.3.1 error: undefined symbol: GEOSVoronoiDiagram
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246 Bug ID: 1021246 Summary: Postgresql94 POSTGIS 2.3.1 error: undefined symbol: GEOSVoronoiDiagram Classification: openSUSE Product: openSUSE Distribution Version: Leap 42.2 Hardware: Other OS: Other Status: NEW Severity: Normal Priority: P5 - None Component: Installation Assignee: yast2-maintainers@suse.de Reporter: spocht@gmx.at QA Contact: jsrain@suse.com Found By: --- Blocker: --- Hello, I get an error when creating the postgis extension: ERROR: could not load library "/usr/lib/postgresql94/lib64/postgis-2.3.so": /usr/lib/postgresql94/lib64/postgis-2.3.so: undefined symbol: GEOSVoronoiDiagram An ldd on postgis-2.3.so gives: linux-vdso.so.1 (0x00007ffc8612f000) libgeos_c.so.1 => /usr/lib64/libgeos_c.so.1 (0x00007f8aa0bb8000) libproj.so.12 => /usr/lib64/libproj.so.12 (0x00007f8aa094d000) libjson-c.so.2 => /usr/lib64/libjson-c.so.2 (0x00007f8aa0741000) libxml2.so.2 => /usr/lib64/libxml2.so.2 (0x00007f8aa03d6000) libm.so.6 => /lib64/libm.so.6 (0x00007f8aa00d9000) libSFCGAL.so.1 => /usr/lib64/libSFCGAL.so.1 (0x00007f8a9f2db000) libc.so.6 => /lib64/libc.so.6 (0x00007f8a9ef38000) libgeos-3.4.2.so => /usr/lib64/libgeos-3.4.2.so (0x00007f8a9eb95000) libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x00007f8a9e80c000) libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007f8a9e5f5000) libpthread.so.0 => /lib64/libpthread.so.0 (0x00007f8a9e3d8000) libdl.so.2 => /lib64/libdl.so.2 (0x00007f8a9e1d3000) libz.so.1 => /lib64/libz.so.1 (0x00007f8a9dfbd000) liblzma.so.5 => /usr/lib64/liblzma.so.5 (0x00007f8a9dd94000) libCGAL.so.10 => /usr/lib64/libCGAL.so.10 (0x00007f8a9db6a000) libCGAL_Core.so.10 => /usr/lib64/libCGAL_Core.so.10 (0x00007f8a9d931000) libmpfr.so.4 => /usr/lib64/libmpfr.so.4 (0x00007f8a9d6d6000) libgmp.so.10 => /usr/lib64/libgmp.so.10 (0x00007f8a9d44e000) libboost_thread.so.1.54.0 => /usr/lib64/libboost_thread.so.1.54.0 (0x00007f8a9d236000) libboost_system.so.1.54.0 => /usr/lib64/libboost_system.so.1.54.0 (0x00007f8a9d032000) libboost_serialization.so.1.54.0 => /usr/lib64/libboost_serialization.so.1.54.0 (0x00007f8a9cdc4000) /lib64/ld-linux-x86-64.so.2 (0x000055fb2fc8b000) librt.so.1 => /lib64/librt.so.1 (0x00007f8a9cbbc000) I realize that libgeos-3.4.2 is picked but in the docu it says that postgis needs libgeos 3.5+. So I installed libgeos-3.5.1 but this is still not used by postgis. And maybe this is not the root of the problem. Would be great if someone could point me into the correct direction. Thx. -- You are receiving this mail because: You are on the CC list for the bug.
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
Mat Feuer
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c1
Andreas Stieger
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c2
Reinhard Max
Reinhard, is that something you could look at?
No, I never did anything with PostGIS and it is not even being maintained in the same project as PostgreSQL. Reassigning to Bruno Friedmann who contributed the last four upgrades. Bruno, if you can't handle it, please pass it on to the maintainers of Application:Geo. -- You are receiving this mail because: You are on the CC list for the bug.
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c3
Bruno Friedmann
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c4
Mat Feuer
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c5
--- Comment #5 from Bruno Friedmann
From what I'm seeing at build time, postgis use geos present in Application:Geo (which is quite normal) and so geos 3.5.1 is used.
At least here from 13.1 to Tumbleweed, when postgis, gdal, geos and so are all coming from Application:Geo everything work as expected. Can I test the fact to upgrade to Application:Geo normally a zypper -v dup --from App:geo should do the trick Use the -D (dry run) and please paste the output of conflicts or change. What I'm afraid, is that we found some incompatibilities with other software.
From what I've seen from a pure oss+non-oss+application:geo 42.2 installation I didn't find software which depend on libgeos_c1 more than those from App:Geo
zypper -v rm libgeos_c1 give me gdal 2.1.2-41.18 libgdal20 2.1.2-41.18 libgeos_c1 3.5.1-18.2 liblwgeom-2_3-0 2.3.1-10.11 libspatialite7 4.3.0a-8.18 postgresql94-pgRouting 2.3.1-4.1 postgresql94-postgis 2.3.1-10.11 postgresql94-postgis-utils 2.3.1-10.11 all of them come from Application:Geo -- You are receiving this mail because: You are on the CC list for the bug.
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c6
--- Comment #6 from Mat Feuer
sudo zypper -v dup -D --from Application:Geo
[ ... all the Retrieving lines omitted ... ] Loading repository data... Reading installed packages... Computing distribution upgrade... Force resolution: No The following 2 NEW packages are going to be installed: libgeos_c1 3.5.1-18.2 libopenblas_pthreads0 0.2.19-1.2 The following package is going to be REMOVED: geos 3.4.2-6.5 The following 18 packages are going to be upgraded: json-glib-lang 1.2.2-1.2 -> 1.2.2-63.3 libfreexl1 1.0.2-1.1 -> 1.0.2-17.2 libgdal20 2.1.0-1.28 -> 2.1.2-41.19 libgeotiff2 1.4.1-3.3 -> 1.4.2-11.4 libgps22 3.15-1.13 -> 3.16-84.32 libgypsy0 0.9-11.3 -> 0.9-36.7 libhdf4 4.2.11-3.5 -> 4.2.11-38.15 libjson-glib-1_0-0 1.2.2-1.2 -> 1.2.2-63.3 liblwgeom-2_3-0 2.3.1-10.12 -> 2.3.1-10.13 libopenjp2-7 2.1.0-11.1 -> 2.1.2-33.2 libSFCGAL1 1.3.0-1.114 -> 1.3.0-1.115 libspatialite7 4.2.0-3.14 -> 4.3.0a-8.18 libzbar0 0.10_2013_02_28-5.1 -> 0.10_2013_02_28-11.3 postgresql94-postgis 2.3.1-10.12 -> 2.3.1-10.13 proj 4.9.2-2.17 -> 4.9.3-27.3 python3-numpy 1.9.3-2.21 -> 1.12.0-56.1 python-enum34 1.0-3.1 -> 1.1.3-8.2 python-numpy 1.8.0-4.17 -> 1.12.0-153.1 The following 10 packages are going to be downgraded: libwx_baseu_net-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_baseu-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_baseu_xml-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_adv-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_aui-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_core-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_gl-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_html-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_qa-suse1 3.0.2-7.18 -> 3.0.2-1.82 libwx_gtk2u_xrc-suse1 3.0.2-7.18 -> 3.0.2-1.82 The following 25 packages are going to change vendor: json-glib-lang 1.2.2-1.2 -> 1.2.2-63.3 openSUSE -> obs://build.opensuse.org/Application:Geo libfreexl1 1.0.2-1.1 -> 1.0.2-17.2 openSUSE -> obs://build.opensuse.org/Application:Geo libgdal20 2.1.0-1.28 -> 2.1.2-41.19 openSUSE -> obs://build.opensuse.org/Application:Geo libgeotiff2 1.4.1-3.3 -> 1.4.2-11.4 openSUSE -> obs://build.opensuse.org/Application:Geo libgps22 3.15-1.13 -> 3.16-84.32 openSUSE -> obs://build.opensuse.org/Application:Geo libgypsy0 0.9-11.3 -> 0.9-36.7 openSUSE -> obs://build.opensuse.org/Application:Geo libhdf4 4.2.11-3.5 -> 4.2.11-38.15 openSUSE -> obs://build.opensuse.org/Application:Geo libjson-glib-1_0-0 1.2.2-1.2 -> 1.2.2-63.3 openSUSE -> obs://build.opensuse.org/Application:Geo libopenjp2-7 2.1.0-11.1 -> 2.1.2-33.2 openSUSE -> obs://build.opensuse.org/Application:Geo libspatialite7 4.2.0-3.14 -> 4.3.0a-8.18 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_baseu_net-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_baseu-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_baseu_xml-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_adv-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_aui-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_core-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_gl-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_html-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_qa-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libwx_gtk2u_xrc-suse1 3.0.2-7.18 -> 3.0.2-1.82 openSUSE -> obs://build.opensuse.org/Application:Geo libzbar0 0.10_2013_02_28-5.1 -> 0.10_2013_02_28-11.3 openSUSE -> obs://build.opensuse.org/Application:Geo proj 4.9.2-2.17 -> 4.9.3-27.3 openSUSE -> obs://build.opensuse.org/Application:Geo python3-numpy 1.9.3-2.21 -> 1.12.0-56.1 openSUSE -> obs://build.opensuse.org/Application:Geo python-enum34 1.0-3.1 -> 1.1.3-8.2 openSUSE -> obs://build.opensuse.org/Application:Geo python-numpy 1.8.0-4.17 -> 1.12.0-153.1 openSUSE -> obs://build.opensuse.org/Application:Geo 18 packages to upgrade, 10 to downgrade, 2 new, 1 to remove, 25 to change vendor. ------------------
sudo zypper -v rm libgeos_c1
Verbosity: 1 Non-option program arguments: 'libgeos_c1' Initializing Target Loading repository data... Reading installed packages... Force resolution: Yes 'libgeos_c1' not found in package names. Trying capabilities. No provider of 'libgeos_c1' found. Resolving package dependencies... Force resolution: Yes Nothing to do. ---------------- -- You are receiving this mail because: You are on the CC list for the bug.
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c7
Bruno Friedmann
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c8
Mat Feuer
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246
http://bugzilla.opensuse.org/show_bug.cgi?id=1021246#c9
--- Comment #9 from Bruno Friedmann
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