[Bug 781794] New: openSUSE:12.2/pymol: Bug
https://bugzilla.novell.com/show_bug.cgi?id=781794 https://bugzilla.novell.com/show_bug.cgi?id=781794#c0 Summary: openSUSE:12.2/pymol: Bug Classification: openSUSE Product: openSUSE.org Version: unspecified Platform: Other OS/Version: Linux Status: NEW Severity: Major Priority: P5 - None Component: 3rd party software AssignedTo: dhall@wustl.edu ReportedBy: mikael_widersten@spray.se QAContact: opensuse-communityscreening@forge.provo.novell.com Found By: Community User Blocker: --- Mikael Widersten <mikael_widersten@spray.se> changed: What |Removed |Added ---------------------------------------------------------------------------- Flag| |SHIP_STOPPER? Pymol v. 1.5.0.3 shipped w. 12.2 crashes upon opening .pse files. This happens on both 32-bit and 64-bit installations. Using a 1.4.1 build functions as expected (no crash). Systems: 64-bit: Lenovo Thinkpad X220 Intel core i7-2640M, 4 GB memory, KDE 4.9.1, intel graphics (open source driver and Mesa 8.04) 32-bit: HP Z200 Intel core i5-650, 4 GB memory, NVIDIA Quadro FX1800 (NVIDIA proprietary driver 304.43) -- Configure bugmail: https://bugzilla.novell.com/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are on the CC list for the bug.
https://bugzilla.novell.com/show_bug.cgi?id=781794 https://bugzilla.novell.com/show_bug.cgi?id=781794#c1 --- Comment #1 from Mikael Widersten <mikael_widersten@spray.se> 2012-09-24 12:42:46 UTC --- I should have said that this is the response upon trying to open a typical .se file: micke@loke:~/mols> pymol StEH1-plain.pse PyMOL(TM) Molecular Graphics System, Version 1.5.0.3. Copyright (c) Schrodinger, LLC. All Rights Reserved. Created by Warren L. DeLano, Ph.D. PyMOL is user-supported open-source software. Although some versions are freely available, PyMOL is not in the public domain. If PyMOL is helpful in your work or study, then please volunteer support for our ongoing efforts to create open and affordable scientific software by purchasing a PyMOL Maintenance and/or Support subscription. More information can be found at "http://www.pymol.org". Enter "help" for a list of commands. Enter "help <command-name>" for information on a specific command. Hit ESC anytime to toggle between text and graphics. Detected OpenGL version 2.0 or greater. Shaders available. Detected GLSL version 3.30. OpenGL graphics engine: GL_VENDOR: NVIDIA Corporation GL_RENDERER: Quadro FX 1800/PCIe/SSE2 GL_VERSION: 3.3.0 NVIDIA 304.43 Adapting to Quadro hardware. Detected 2 CPU cores. Enabled multithreaded rendering. Executive: Loading version 0.990 session... /usr/bin/pymol: line 2: 18175 Segmentation fault /usr/bin/python /usr/lib/python2.7/site-packages/pymol/__init__.py "$@" -- Configure bugmail: https://bugzilla.novell.com/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are on the CC list for the bug.
https://bugzilla.novell.com/show_bug.cgi?id=781794 https://bugzilla.novell.com/show_bug.cgi?id=781794#c2 --- Comment #2 from David Hall <dhall@wustl.edu> 2012-09-25 02:36:54 UTC --- I've tried several of my pses and they all work. Are you able to provide a crashing pse? or a pml that saves a pse where it then crashes when you open that pse? -- Configure bugmail: https://bugzilla.novell.com/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are on the CC list for the bug.
https://bugzilla.novell.com/show_bug.cgi?id=781794 https://bugzilla.novell.com/show_bug.cgi?id=781794#c3 David Hall <dhall@wustl.edu> changed: What |Removed |Added ---------------------------------------------------------------------------- Status|NEW |CLOSED Resolution| |UPSTREAM --- Comment #3 from David Hall <dhall@wustl.edu> 2012-12-02 20:16:24 UTC --- upstream is aware of the issue, -- Configure bugmail: https://bugzilla.novell.com/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are on the CC list for the bug.
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