So all the provided information points that the actual size of the underlying device is 1000203820544, which is 3.5kb larger than what the super block thinks. This is also correlated by both the info in the device extent tree and in the multiple copies of the super block. Independently of the filesystem, lsblk also confirms that the device size is 1000203820544.This is odd indeed, so if I understand correctly this volume worked fine before you upgraded to 42.2? If so could you show what number is reported by lsblkid on the old kernel, where this used to work? Also have you performed any device replace operations?