I have lrwxrwxrwx 1 root root 24 4. Okt 12:16 /var/run/ntp -> /var/lib/ntp/var/run/ntp and ntpd works even without the rule added (factory last updated 2014-09-29) Nevertheless, I agree that we should add /{,var/}run/ntp/ntpd.pid w, to the ntpd profile. I just submitted a patch upstream.