Since you asked, here's the second part of the script: if ! a2enmod -q authn_core; then a2enmod authn_core fi if ! a2enmod -q authz_core; then a2enmod authz_core fi if ! a2enmod -q log_config; then a2enmod log_config fi If I disable the log_config module from my configuration, every upgrade will enable it again. Anyway: I will see if I can close this bug, otherwise you will have to do it. Thanks for the support