Comment # 10 on bug 930936 from Oliver Neukum

OK, this is not the known buggy chipset. In your dmesg the HC died:

[   41.949178] xhci_hcd 0000:02:00.0: Timeout while waiting for setup device
command
[   47.160143] xhci_hcd 0000:02:00.0: Timeout while waiting for setup device
command
[   47.360897] usb 4-4: device not accepting address 2, error -62
[   51.278248] usb usb4-port4: Cannot enable. Maybe the USB cable is bad?
[   53.356215] usb usb4-port4: Could not disable after 2000 ms
[   53.710551] usb 4-4: reset SuperSpeed USB device number 2 using xhci_hcd
[   53.722574] xhci_hcd 0000:02:00.0: xHCI xhci_drop_endpoint called with
disabled ep ffff880221aca640
[   53.722582] xhci_hcd 0000:02:00.0: xHCI xhci_drop_endpoint called with
disabled ep ffff880221aca688
[   56.197441] xhci_hcd 0000:02:00.0: Stopped the command ring failed, maybe
the host is dead
[   56.197455] xhci_hcd 0000:02:00.0: Abort command ring failed
[   56.197457] xhci_hcd 0000:02:00.0: HC died; cleaning up

Is that the dmesg you took before the hibernation failed?