Hello community, here is the log from the commit of package gromacs checked in at Mon Oct 16 02:13:13 CEST 2006. -------- --- gromacs/gromacs.changes 2006-07-19 13:38:48.000000000 +0200 +++ /mounts/work_src_done/STABLE/gromacs/gromacs.changes 2006-10-16 01:33:35.000000000 +0200 @@ -1,0 +2,6 @@ +Mon Oct 16 01:24:15 CEST 2006 - schwab@suse.de + +- Use install-exec-hook instead of install-hook. +- Use AM_PROG_AS. + +------------------------------------------------------------------- ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ gromacs.spec ++++++ --- /var/tmp/diff_new_pack.qbXRBa/_old 2006-10-16 02:13:02.000000000 +0200 +++ /var/tmp/diff_new_pack.qbXRBa/_new 2006-10-16 02:13:02.000000000 +0200 @@ -13,7 +13,7 @@ Name: gromacs BuildRequires: fftw3-devel xorg-x11-devel Version: 3.3.1 -Release: 1 +Release: 10 Summary: Molecular Dynamics Package URL: http://www.gromacs.org License: GPL @@ -123,6 +123,9 @@ %{prefix}/include/gromacs/* %changelog -n gromacs +* Mon Oct 16 2006 - schwab@suse.de +- Use install-exec-hook instead of install-hook. +- Use AM_PROG_AS. * Wed Jul 19 2006 - kkaempf@suse.de - update to 3.3.1 see http://www.gromacs.org for a complete list of changes. ++++++ gromacs-3.3.1.dif ++++++ --- /var/tmp/diff_new_pack.qbXRBa/_old 2006-10-16 02:13:03.000000000 +0200 +++ /var/tmp/diff_new_pack.qbXRBa/_new 2006-10-16 02:13:03.000000000 +0200 @@ -1,6 +1,16 @@ -diff -wruN ../orig-gromacs-3.3.1/acinclude.m4 ./acinclude.m4 ---- ../orig-gromacs-3.3.1/acinclude.m4 2006-04-06 21:21:44.000000000 +0200 -+++ ./acinclude.m4 2006-07-19 10:07:35.000000000 +0200 +--- Makefile.am ++++ Makefile.am +@@ -17,7 +17,7 @@ + + EXTRA_DIST = config/depcomp + +-install-hook: ++install-exec-hook: + @echo "" + @echo "GROMACS is installed under $(prefix)." + @echo "Make sure to update your PATH and MANPATH to find the" +--- acinclude.m4 ++++ acinclude.m4 @@ -1268,6423 +1268,3 @@ fi AC_LANG_RESTORE @@ -6425,9 +6435,8 @@ -AC_MSG_RESULT([$SED]) -]) - -diff -wruN ../orig-gromacs-3.3.1/admin/programs.txt ./admin/programs.txt ---- ../orig-gromacs-3.3.1/admin/programs.txt 2006-03-30 19:27:33.000000000 +0200 -+++ ./admin/programs.txt 2006-07-19 10:03:51.000000000 +0200 +--- admin/programs.txt ++++ admin/programs.txt @@ -56,8 +56,8 @@ g_confrms|fits two structures and calculates the rmsd g_cluster|clusters structures @@ -6450,10 +6459,17 @@ anadock|cluster structures from Autodock runs END -diff -wruN ../orig-gromacs-3.3.1/configure.ac ./configure.ac ---- ../orig-gromacs-3.3.1/configure.ac 2006-04-06 21:16:00.000000000 +0200 -+++ ./configure.ac 2006-07-19 11:58:45.000000000 +0200 -@@ -840,7 +840,7 @@ +--- configure.ac ++++ configure.ac +@@ -314,6 +314,7 @@ + + + AC_PROG_CPP ++AM_PROG_AS + + if test "$enable_cpu_optimization" = "yes"; then + ACX_DETECT_GMXCPU +@@ -840,7 +841,7 @@ # we have asm source, so this is necessary for automake 1.6 CCAS=$CC @@ -6462,9 +6478,8 @@ AC_SUBST(CCAS) AC_SUBST(CCASFLAGS) -diff -wruN ../orig-gromacs-3.3.1/man/man1/cdist.1 ./man/man1/cdist.1 ---- ../orig-gromacs-3.3.1/man/man1/cdist.1 2005-08-29 21:39:39.000000000 +0200 -+++ ./man/man1/cdist.1 2006-07-19 10:03:51.000000000 +0200 +--- man/man1/cdist.1 ++++ man/man1/cdist.1 @@ -38,7 +38,7 @@ .SH DESCRIPTION cdist read a @@ -6501,9 +6516,8 @@ .BI "-[no]vir" " no" Use virtual particles -diff -wruN ../orig-gromacs-3.3.1/man/man1/disco.1 ./man/man1/disco.1 ---- ../orig-gromacs-3.3.1/man/man1/disco.1 2005-08-29 21:39:39.000000000 +0200 -+++ ./man/man1/disco.1 2006-07-19 10:05:20.000000000 +0200 +--- man/man1/disco.1 ++++ man/man1/disco.1 @@ -1,9 +1,9 @@ -.TH disco 1 "Mon 29 Aug 2005" +.TH g_disco 1 "Mon 29 Aug 2005" @@ -6539,9 +6553,8 @@ master-slave approach. Slaves work asynchronously, and it is no problem when nodes are not equally fast, or when a node dies, unless it is the master node. -diff -wruN ../orig-gromacs-3.3.1/scripts/completion.bash ./scripts/completion.bash ---- ../orig-gromacs-3.3.1/scripts/completion.bash 2005-09-06 10:01:54.000000000 +0200 -+++ ./scripts/completion.bash 2006-07-19 10:03:51.000000000 +0200 +--- scripts/completion.bash ++++ scripts/completion.bash @@ -44,7 +44,7 @@ -keep) COMPREPLY=( $(compgen -X '!*.+(xtc|trr|trj|gro|g96|pdb|g87)*(.gz|.Z)' -f $c ; compgen -S '/' -X '.*' -d $c ));; -viol) COMPREPLY=( $(compgen -X '!*.pdb*(.gz|.Z)' -f $c ; compgen -S '/' -X '.*' -d $c ));; @@ -6551,9 +6564,8 @@ shopt -s extglob _do_dssp_compl() { local p c -diff -wruN ../orig-gromacs-3.3.1/scripts/completion.csh ./scripts/completion.csh ---- ../orig-gromacs-3.3.1/scripts/completion.csh 2005-09-06 10:01:54.000000000 +0200 -+++ ./scripts/completion.csh 2006-07-19 10:08:16.000000000 +0200 +--- scripts/completion.csh ++++ scripts/completion.csh @@ -1,6 +1,6 @@ complete anadock "n/-f/f:*.pdb{,.gz,.Z}/" "n/-ox/f:*.pdb{,.gz,.Z}/" "n/-od/f:*.xvg{,.gz,.Z}/" "n/-of/f:*.xvg{,.gz,.Z}/" "n/-g/f:*.log{,.gz,.Z}/" "c/-/( f ox od of g h nice noxvgr free norms cutoff)/" complete cdist "n/-sm/( none tri tetra)/" "n/-s/f:*.{tpr,tpb,tpa,gro,g96,pdb,brk,ent}{,.gz,.Z}/" "n/-g/f:*.log{,.gz,.Z}/" "n/-q/f:*.pdb{,.gz,.Z}/" "n/-d/f:*.dat{,.gz,.Z}/" "n/-o/f:*.dat{,.gz,.Z}/" "n/-n/f:*.ndx{,.gz,.Z}/" "n/-dom/f:*.ndx{,.gz,.Z}/" "c/-/( s g q d o n dom h nice noengh bm am pm rr ar er vm lm il dm im nm hm hb nobon nonb measure maxdist add vir sm)/" @@ -6562,9 +6574,8 @@ complete do_dssp "n/-tu/( ps fs ns us ms s m h)/" "n/-f/f:*.{xtc,trr,trj,gro,g96,pdb,g87}{,.gz,.Z}/" "n/-s/f:*.{tpr,tpb,tpa,gro,g96,pdb,brk,ent}{,.gz,.Z}/" "n/-n/f:*.ndx{,.gz,.Z}/" "n/-ssdump/f:*.dat{,.gz,.Z}/" "n/-map/f:*.map{,.gz,.Z}/" "n/-o/f:*.xpm{,.gz,.Z}/" "n/-sc/f:*.xvg{,.gz,.Z}/" "n/-a/f:*.xpm{,.gz,.Z}/" "n/-ta/f:*.xvg{,.gz,.Z}/" "n/-aa/f:*.xvg{,.gz,.Z}/" "c/-/( f s n ssdump map o sc a ta aa h nice b e dt tu w noxvgr sss)/" complete editconf "n/-bt/( tric cubic dodecahedron octahedron)/" "n/-f/f:*.{gro,g96,pdb,brk,ent,esp,tpr,tpb,tpa}{,.gz,.Z}/" "n/-n/f:*.ndx{,.gz,.Z}/" "n/-o/f:*.{gro,g96,pdb,brk,ent,esp}{,.gz,.Z}/" "n/-mead/f:*.pqr{,.gz,.Z}/" "n/-bf/f:*.dat{,.gz,.Z}/" "c/-/( f n o mead bf h nice w ndef bt box angles d c center translate rotate princ scale density novol pbc grasp rvdw sig56 vdwread atom legend label)/" complete eneconv "n/-f/f:*.{edr,ene}{,.gz,.Z}/" "n/-o/f:*.{edr,ene}{,.gz,.Z}/" "c/-/( f o h nice b e dt offset settime nosort scalefac noerror)/" -diff -wruN ../orig-gromacs-3.3.1/scripts/completion.zsh ./scripts/completion.zsh ---- ../orig-gromacs-3.3.1/scripts/completion.zsh 2005-09-06 10:01:54.000000000 +0200 -+++ ./scripts/completion.zsh 2006-07-19 10:08:51.000000000 +0200 +--- scripts/completion.zsh ++++ scripts/completion.zsh @@ -1,6 +1,6 @@ compctl -x 's[-]' -s " f ox od of g h nice noxvgr free norms cutoff" - 'c[-1,-f]' -g '*.pdb(|.gz|.Z) *(/)' - 'c[-1,-ox]' -g '*.pdb(|.gz|.Z) *(/)' - 'c[-1,-od]' -g '*.xvg(|.gz|.Z) *(/)' - 'c[-1,-of]' -g '*.xvg(|.gz|.Z) *(/)' - 'c[-1,-g]' -g '*.log(|.gz|.Z) *(/)' -- anadock compctl -x 's[-]' -s " s g q d o n dom h nice noengh bm am pm rr ar er vm lm il dm im nm hm hb nobon nonb measure maxdist add vir sm" - 'c[-1,-sm]' -s " none tri tetra" - 'c[-1,-s]' -g '*.(tpr|tpb|tpa|gro|g96|pdb|brk|ent)(|.gz|.Z) *(/)' - 'c[-1,-g]' -g '*.log(|.gz|.Z) *(/)' - 'c[-1,-q]' -g '*.pdb(|.gz|.Z) *(/)' - 'c[-1,-d]' -g '*.dat(|.gz|.Z) *(/)' - 'c[-1,-o]' -g '*.dat(|.gz|.Z) *(/)' - 'c[-1,-n]' -g '*.ndx(|.gz|.Z) *(/)' - 'c[-1,-dom]' -g '*.ndx(|.gz|.Z) *(/)' -- cdist @@ -6573,9 +6584,8 @@ compctl -x 's[-]' -s " f s n ssdump map o sc a ta aa h nice b e dt tu w noxvgr sss" - 'c[-1,-tu]' -s " ps fs ns us ms s m h" - 'c[-1,-f]' -g '*.(xtc|trr|trj|gro|g96|pdb|g87)(|.gz|.Z) *(/)' - 'c[-1,-s]' -g '*.(tpr|tpb|tpa|gro|g96|pdb|brk|ent)(|.gz|.Z) *(/)' - 'c[-1,-n]' -g '*.ndx(|.gz|.Z) *(/)' - 'c[-1,-ssdump]' -g '*.dat(|.gz|.Z) *(/)' - 'c[-1,-map]' -g '*.map(|.gz|.Z) *(/)' - 'c[-1,-o]' -g '*.xpm(|.gz|.Z) *(/)' - 'c[-1,-sc]' -g '*.xvg(|.gz|.Z) *(/)' - 'c[-1,-a]' -g '*.xpm(|.gz|.Z) *(/)' - 'c[-1,-ta]' -g '*.xvg(|.gz|.Z) *(/)' - 'c[-1,-aa]' -g '*.xvg(|.gz|.Z) *(/)' -- do_dssp compctl -x 's[-]' -s " f n o mead bf h nice w ndef bt box angles d c center translate rotate princ scale density novol pbc grasp rvdw sig56 vdwread atom legend label" - 'c[-1,-bt]' -s " tric cubic dodecahedron octahedron" - 'c[-1,-f]' -g '*.(gro|g96|pdb|brk|ent|esp|tpr|tpb|tpa)(|.gz|.Z) *(/)' - 'c[-1,-n]' -g '*.ndx(|.gz|.Z) *(/)' - 'c[-1,-o]' -g '*.(gro|g96|pdb|brk|ent|esp)(|.gz|.Z) *(/)' - 'c[-1,-mead]' -g '*.pqr(|.gz|.Z) *(/)' - 'c[-1,-bf]' -g '*.dat(|.gz|.Z) *(/)' -- editconf compctl -x 's[-]' -s " f o h nice b e dt offset settime nosort scalefac noerror" - 'c[-1,-f]' -g '*.(edr|ene)(|.gz|.Z) *(/)' - 'c[-1,-o]' -g '*.(edr|ene)(|.gz|.Z) *(/)' -- eneconv -diff -wruN ../orig-gromacs-3.3.1/share/html/online.html ./share/html/online.html ---- ../orig-gromacs-3.3.1/share/html/online.html 2005-09-06 10:05:59.000000000 +0200 -+++ ./share/html/online.html 2006-07-19 10:03:51.000000000 +0200 +--- share/html/online.html ++++ share/html/online.html @@ -48,7 +48,7 @@ <br> <br><a href=online/anadock.html>anadock</a> @@ -6607,9 +6617,8 @@ <TR><TD><A HREF="online/anadock.html">anadock</A></TD><TD>cluster structures from Autodock runs</TD> </TABLE> -diff -wruN ../orig-gromacs-3.3.1/share/top/Makefile.am ./share/top/Makefile.am ---- ../orig-gromacs-3.3.1/share/top/Makefile.am 2005-10-11 13:55:04.000000000 +0200 -+++ ./share/top/Makefile.am 2006-07-19 10:03:51.000000000 +0200 +--- share/top/Makefile.am ++++ share/top/Makefile.am @@ -50,7 +50,7 @@ export.dlg bonds.dlg ss.map ps.m2p \ table6-10.xvg table6-11.xvg table6-12.xvg table6-8.xvg \ ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Remember to have fun... --------------------------------------------------------------------- To unsubscribe, e-mail: opensuse-commit+unsubscribe@opensuse.org For additional commands, e-mail: opensuse-commit+help@opensuse.org