[Bug 946067] New: Corruption in RPM DB after fresh 42.1M2 install - openSUSE Bugs - openSUSE Mailing Lists

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[Bug 946067] Corruption in RPM DB...

[Bug 946067] New: Corruption in RPM DB after fresh 42.1M2 install

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bugzilla_noreply＠novell.com

16 Sep 2015 16 Sep '15

14:24

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 Bug ID: 946067 Summary: Corruption in RPM DB after fresh 42.1M2 install Classification: openSUSE Product: openSUSE Factory Version: 201505* Hardware: x86-64 OS: openSUSE 42.1 Status: NEW Severity: Minor Priority: P5 - None Component: Basesystem Assignee: bnc-team-screening@forge.provo.novell.com Reporter: rogers-suse@rgrjr.dyndns.org QA Contact: qa-bugs@suse.de Found By: --- Blocker: --- Immediately after installing, I get the following persistent error when querying all installed RPMs: thebes:~ # rpm -qa | wc error: rpmdbNextIterator: skipping h# 1558 Header V3 RSA/SHA256 Signature, key ID 3dbdc284: BAD 1998 1998 63954 thebes:~ # The output looks normal; if anything is missing, it is not obvious to me. I have seen similar errors before, but never after a fresh install. For the save_y2logs tarball from this installation, see bug#945929. -- You are receiving this mail because: You are on the CC list for the bug.

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18 Sep 18 Sep

17:01

New subject: [Bug 946067] Corruption in RPM DB after fresh 42.1M2 install

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 http://bugzilla.opensuse.org/show_bug.cgi?id=946067#c3 Bob Rogers changed: What |Removed |Added ---------------------------------------------------------------------------- Flags|needinfo?(rogers-suse@rgrjr | |.dyndns.org) | --- Comment #3 from Bob Rogers --- Here's what I get (with description omitted): rogers@thebes> rpm -qi --querybynumber 1558 --nodigest --nosignature rpm -qi --querybynumber 1558 --nodigest --nosignature Name : libreoffice Version : 4.3.5.2 Release : 12.1 Architecture: x86_64 Install Date: Mon 14 Sep 2015 03:56:27 PM EDT Group : Productivity/Office/Suite Size : 222033984 License : Apache-2.0 and Artistic-1.0 and BSD-3-Clause and BSD-4-Clause and GPL-2.0+ and LPPL-1.3c and LGPL-2.1+ and LGPL-3.0 and MPL-1.1 and MIT and SUSE-Public-Domain and W3C Signature : RSA/SHA256, Thu 27 Aug 2015 12:22:01 PM EDT, Key ID b88b2fd43dbdc284 Source RPM : libreoffice-4.3.5.2-12.1.src.rpm Build Date : Thu 27 Aug 2015 11:49:58 AM EDT Build Host : cloud138 Relocations : (not relocatable) Vendor : obs://build.opensuse.org/openSUSE:42 URL : http://www.documentfoundation.org/ Summary : A Free Office Suite (Framework) Description : . . . Distribution: openSUSE:42 rogers@thebes> -- You are receiving this mail because: You are on the CC list for the bug.

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22 Sep 22 Sep

19:54

New subject: [Bug 946067] Corruption in RPM DB after fresh 42.1M2 install

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 http://bugzilla.opensuse.org/show_bug.cgi?id=946067#c6 --- Comment #6 from Bob Rogers --- Here's the rpm output: thebes:~ # rpm -q -v -v -v --querybynumber 1558 D: package record number: 1558 D: loading keyring from pubkeys in /var/lib/rpm/pubkeys/*.key D: couldn't find any keys in /var/lib/rpm/pubkeys/*.key D: loading keyring from rpmdb D: opening db environment /var/lib/rpm cdb:private:0x201 D: opening db index /var/lib/rpm/Packages 0x400 mode=0x0 D: locked db index /var/lib/rpm/Packages D: opening db index /var/lib/rpm/Name nofsync:0x400 mode=0x0 D: read h# 2007 Header SHA1 digest: OK (121869ebdc8e8ddf647915a929aa17a985500257) D: added key gpg-pubkey-3dbdc284-53674dd4 to keyring D: Using legacy gpg-pubkey(s) from rpmdb D: read h# 1558 Header V3 RSA/SHA256 Signature, key ID 3dbdc284: OK libreoffice-4.3.5.2-12.1.x86_64 D: closed db index /var/lib/rpm/Name D: closed db index /var/lib/rpm/Packages D: closed db environment /var/lib/rpm thebes:~ # The rpmdumpheader output is almost 700K, so I will add it as an attachment. -- You are receiving this mail because: You are on the CC list for the bug.

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19:57

New subject: [Bug 946067] Corruption in RPM DB after fresh 42.1M2 install

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 http://bugzilla.opensuse.org/show_bug.cgi?id=946067#c7 --- Comment #7 from Bob Rogers --- Created attachment 648623 --> http://bugzilla.opensuse.org/attachment.cgi?id=648623&action=edit rpmdumpheader output -- You are receiving this mail because: You are on the CC list for the bug.

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25 Sep 25 Sep

16:31

New subject: [Bug 946067] Corruption in RPM DB after fresh 42.1M2 install

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 http://bugzilla.opensuse.org/show_bug.cgi?id=946067#c11 --- Comment #11 from Bob Rogers --- Nothing that looks suspicious to me (though I have no experience interpreting valgrind output). Here are the summaries: ==2648== HEAP SUMMARY: ==2648== in use at exit: 3,755 bytes in 4 blocks ==2648== total heap usage: 88,648 allocs, 88,644 frees, 119,589,832 bytes allocated ==2648== ==2648== LEAK SUMMARY: ==2648== definitely lost: 0 bytes in 0 blocks ==2648== indirectly lost: 0 bytes in 0 blocks ==2648== possibly lost: 0 bytes in 0 blocks ==2648== still reachable: 3,755 bytes in 4 blocks ==2648== suppressed: 0 bytes in 0 blocks ==2648== Rerun with --leak-check=full to see details of leaked memory ==2648== ==2648== For counts of detected and suppressed errors, rerun with: -v ==2648== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) Running with greater levels of detail doesn't show anything more that jumps out at me. Note that I am still getting the same warnings about skipping headers 624 and 638 after doing "zypper install valgrind". -- You are receiving this mail because: You are on the CC list for the bug.

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30 Sep 30 Sep

14:07

New subject: [Bug 946067] Corruption in RPM DB after fresh 42.1M2 install

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 http://bugzilla.opensuse.org/show_bug.cgi?id=946067#c12 Stanislav Brabec changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |sbrabec@suse.com --- Comment #12 from Stanislav Brabec --- I experienced a similar problem: oct:~ # zypper dup --from openSUSE-Tumbleweed-Oss --from openSUSE-Tumbleweed-Non-Oss ... ( 8/1039) Instaluje se: bundle-lang-kde-en-13.2-12.4 ..............................................................[chyba] Instalace bundle-lang-kde-en-13.2-12.4 selhala: Chyba: Subprocess failed. Error: RPM selhalo: Příkaz byl ukončen s kódem 1. (A) Přerušit, (R) opakovat, (I) ignorovat? [a/r/i] (a): r Instalace bundle-lang-kde-en-13.2-12.4 selhala: Chyba: Subprocess failed. Error: RPM selhalo: error: unpacking of archive failed on file /usr/share/doc-bundle/kde/HTML/en/amarok/Face-smile.png: cpio: rename error: bundle-lang-kde-en-13.2-12.4.noarch: install failed error: bundle-lang-kde-en-13.2-12.2.noarch: erase skipped (A) Přerušit, (R) opakovat, (I) ignorovat? [a/r/i] (a): i ( 9/1039) Instaluje se: geda-doc-1.8.2-5.4 ........................................................................[chyba] Instalace geda-doc-1.8.2-5.4 selhala: Chyba: Subprocess failed. Error: RPM selhalo: error: unpacking of archive failed on file /usr/share/doc/packages/geda-gaf/wiki/geda-bom_readme.ru.html: cpio: rename error: geda-doc-1.8.2-5.4.noarch: install failed Instalace geda-symbols-1.8.2-5.4 selhala: Chyba: Subprocess failed. Error: RPM selhalo: error: unpacking of archive failed on file /usr/share/gEDA/sym/4000/4000-1.sym: cpio: rename error: geda-symbols-1.8.2-5.4.noarch: install failed error: geda-symbols-1.8.2-5.3.noarch: erase skipped (A) Přerušit, (R) opakovat, (I) ignorovat? [a/r/i] (a): i ( 11/1039) Instaluje se: glibc-i18ndata-2.22-2.2 ...................................................................[chyba] Instalace glibc-i18ndata-2.22-2.2 selhala: Chyba: Subprocess failed. Error: RPM selhalo: error: unpacking of archive failed on file /usr/share/i18n/charmaps/ANSI_X3.110-1983.gz: cpio: rename error: glibc-i18ndata-2.22-2.2.noarch: install failed error: glibc-i18ndata-2.22-1.1.noarch: erase skipped (A) Přerušit, (R) opakovat, (I) ignorovat? [a/r/i] (a): Došlo k chybě v průběhu instalace nebo odstraňování nebo po instalaci či odstranění balíčků: Installation aborted by user ... oct:~ # LANG=C zypper dup --from openSUSE-Tumbleweed-Oss --from openSUSE-Tumbleweed-Non-Oss Target initialization failed: Failed to cache rpm database (1). -- You are receiving this mail because: You are on the CC list for the bug.

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14:11

New subject: [Bug 946067] Corruption in RPM DB after fresh 42.1M2 install

http://bugzilla.opensuse.org/show_bug.cgi?id=946067 http://bugzilla.opensuse.org/show_bug.cgi?id=946067#c13 --- Comment #13 from Stanislav Brabec --- In my case, it has something to do with the file system, brtfs or snapper: oct:~ # cp -a /var/lib/rpm /var/lib/rpm.save cp: cannot create directory '/var/lib/rpm.save': No space left on device oct:~ # df /var/lib Filesystem 1K-blocks Used Available Use% Mounted on /dev/sdb1 41945088 37520524 4374356 90% / -- You are receiving this mail because: You are on the CC list for the bug.

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